PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0264s0021.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 266aa    MW: 29973.6 Da    PI: 8.9035
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0264s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.11.5e-312579155
              G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                         k+rlrWt eLHerF ea++qLGG+++AtPk il++m+v+gLt++hvkSHLQkYR+
  Kalax.0264s0021.1.p 25 KERLRWTDELHERFEEAINQLGGADRATPKGILKTMDVPGLTIYHVKSHLQKYRV 79
                         68****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.4112282IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.5E-302380IPR009057Homeodomain-like
SuperFamilySSF466898.51E-192479IPR009057Homeodomain-like
TIGRFAMsTIGR015574.7E-242579IPR006447Myb domain, plants
PfamPF002492.9E-82778IPR001005SANT/Myb domain
PfamPF143791.9E-8110150IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MGTSSGVSEE NNGSSSTSSS GSNRKERLRW TDELHERFEE AINQLGGADR ATPKGILKTM  60
DVPGLTIYHV KSHLQKYRVA KFVPESSNRG KYERRSISEM LPNFSATSAV QLNEALRLHM  120
EAERQLSHRM EASLKLKIEA QGRYMDRITE DLRAGKSVTM KPAEPFNPIT SLPSLCDESE  180
SNSPKDQLSE PHLQSRALKR FRVEHDLVSA PQMPDNYAPQ YLTRPYDGQT EMFNNQGLRR  240
VQYPVHDMSV PWNLTVSGPS PRMPN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010653298.15e-85PREDICTED: protein PHR1-LIKE 1-like isoform X2
TrEMBLD7SY151e-79D7SY15_VITVI; Putative uncharacterized protein
STRINGVIT_08s0105g00370.t013e-79(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.15e-48G2-like family protein